Detailed Options
================

.. py:module:: spats_shape_seq

.. autofunction:: run_spats

.. autoclass:: spats_shape_seq.spats.Spats
   :members:
   :undoc-members:

.. autoclass:: spats_shape_seq.run.Run
   :members:
   :undoc-members:

.. autoclass:: spats_shape_seq.reads.ReadsData
   :members:
   :undoc-members:

.. autoclass:: spats_shape_seq.reads.ReadsAnalyzer
   :members:
   :undoc-members: